Dear Dr.Christoph, Thanks for the message. I tried to access the application(not sure it is a downloable java app with jar or web-based app), via the link you gave. It invariably takes me to a 3-D protein structure viewer!.
Could you please let me know, how do I get hold of this tool? Best Regards Manjula On 4/29/10 11:47 AM, "Dr. Christoph Gille" <[email protected]> wrote: > > In our team we reconstruct metabolic networks and therefore we need to screen > hundreds of pubmed references to find evidences for certain > metabolic reactions in the literature. > > We use this simple Java-application: > http://www.bioinformatics.org/strap/strap.php?pubmed=t > > We proceed as follows: > We make a list of Pmid-numbers. > > We move the mouse over the list and then we go for a coffee to > give the system sufficient time to cache the Abstracts. > > Then we move again the mouse over the list of PMID numbers. This > time we observe color text high-lightings (defined by > Ctrl-F "Find") to appear in the abstract panel. > > If abstract is too big, then the high-lightings may appear in the > vertical scroll-bar of the text panel. > > > The system might automatically identify full text links by following the links > provided by NCBI. > In all cases PDF can be manually associated. > > In this case this visual text-mining can be performed for full text. > > > > http://www.bioinformatics.org/strap/strap.php?pubmed=t > > Appart from this, professional Literature managers such as Jabref or Mendeley > are able to load lists of pubmed abstracts. > > > > _______________________________________________ > BBB mailing list > [email protected] > http://www.bioinformatics.org/mailman/listinfo/bbb _______________________________________________ BBB mailing list [email protected] http://www.bioinformatics.org/mailman/listinfo/bbb
