Try INFOSEQ (Gary Williams), a program available with the EMBOSS package Command line:
infoseq -sequence=your.fasta -only -length -auto EMBOSS is installed in many places and has open source. I agree, do not reinvent the wheel! Pedro -- Pedro Fernandes Centro Português de Bioinformática Instituto Gulbenkian de Ciência Apartado 14 2781 OEIRAS PORTUGAL Quoting Pankaj Khurana <[email protected]>: > Hi all, > > I have a few 1000 fasta files. I would like to get the list showing the > sequence name and their respective lengths. > Is there a program for this? > I can write one but why reinvent the wheel. > Thanking all in advance > > Regards, > Pankaj > _______________________________________________ > BBB mailing list > [email protected] > http://www.bioinformatics.org/mailman/listinfo/bbb > _______________________________________________ BBB mailing list [email protected] http://www.bioinformatics.org/mailman/listinfo/bbb
