Hi I have developed a new scoring matrix to replace PAM, can anyone suggest how we can test this out in alignment tools inclusing BLAST ? Is there a tool which accepts user defined scoring matrix ? Thanks in advance Achu
-- Dr Achuthsankar S Nair Director, State Inter-University Centre for Bioinformatics University of Kerala, Trivandrum 695581, INDIA Tel (O) 471-2308759 (R) 471-2542220 www.cbi.keralauniversity.edu www.achu.keralauniversity.edu _______________________________________________ BBB mailing list [email protected] http://www.bioinformatics.org/mailman/listinfo/bbb
