Phoebe Rice <[email protected]> writes: > Blast gives me pages of 99% identical proteins (mostly from other > S. aureus strains), and I'm too lazy to pick "representatives" > manually from further down the list. What is the best way to get a > list of related proteins that are all, say, <90% identical to other > proteins in the list?
I don't know if these are in UniProt, but if they are, you can search the UniRef 90 (or 50) database, which consists of proteins with at most 90 (50) percent similarity. -k -- If I haven't seen further, it is by standing in the footprints of giants _______________________________________________ BBB mailing list [email protected] http://www.bioinformatics.org/mailman/listinfo/bbb
