In my experimentations, you can use the SYSBOOT muxed pins without problem 
as long as you just let them float during powerup 



On Wednesday, January 15, 2014 9:39:30 AM UTC-5, Satz Klauer wrote:
>
> OK, just to verify that: when I use these pins for something different 
> and set an input signal to them only when SYS_RESETn is HIGH, 
> everything is fine and the board will boot!? 
>
> On Wed, Jan 15, 2014 at 2:47 PM, Gerald Coley 
> <[email protected]<javascript:>> 
> wrote: 
> > The tell the internal boot ROM where to find the code to load. It is 
> > described in the System Reference Manual for the board. Being set wrong 
> due 
> > to interference with the boot pins, the board will never run. 
> > 
> > Gerald 
> > 
> > 
> > 
> > On Wed, Jan 15, 2014 at 4:33 AM, Satz Klauer 
> > <[email protected]<javascript:>> 
>
> > wrote: 
> >> 
> >> On Tue, Jan 14, 2014 at 3:49 PM, dl4mea <[email protected] <javascript:>> 
> wrote: 
> >> > Take care you don't change one of the SYSBOOT pin's value by your own 
> >> > pullup/pulldown. 
> >> 
> >> Thats interesting...what are the SYSBOOT pins exactly? 
> >> 
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