Thanks for your reply Charles,

On Fri, 25 Feb 2005 09:10:54 -0600, Charles K. Clarkson <[EMAIL PROTECTED]> wrote:

    Is it always data1, data2, data3, etc. or can data be
another word? (Like foo1, foo2, foo3, etc.)


it always comes in (R-P) pair: data1R.fa data1P.fa foo1R.fa foo1P.fa bar2R.fa bar2P.fa


So "data1R.fa" is always processed with "data1P.fa", and so forth.


Is the extension always .fa or can it be something else?

Yes the extension is always ".fa"


Will every R file have a matching P file or will some extra files be located in the directory? For example, will there sometimes be a data14R.fa file and no corresponding data14P.fa file?

No, there will always be a corresponding file. i.e. *R.fa always have its *P.fa file



Will there be other files located in this directory?

Yes, but they won't be any other *R.fa *P.fa type.



Charles K. Clarkson



-- Regards, Edward WIJAYA Singapore

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