I have obtain results of a query in XML format:
<?xml version="1.0"?>
<!DOCTYPE eSummaryResult PUBLIC "-//NLM//DTD eSummaryResult, 29 October
2004//EN"
"http://www.ncbi.nlm.nih.gov/entrez/query/DTD/eSummary_041029.dtd";>
<eSummaryResult>
<DocSum>
<Id>4609</Id>
<Item Name="Name" Type="String">MYC</Item>
<Item Name="Description" Type="String">v-myc myelocytomatosis
viral oncogene homolog (avian)</Item>
<Item Name="Orgname" Type="String">Homo sapiens</Item>
<Item Name="Status" Type="Integer">0</Item>
<Item Name="CurrentID" Type="Integer">0</Item>
<Item Name="Chromosome" Type="String">8</Item>
<Item Name="GeneticSource" Type="String">genomic</Item>
<Item Name="MapLocation" Type="String">8q24.12-q24.13</Item>
<Item Name="OtherAliases" Type="String">c-Myc</Item>
<Item Name="OtherDesignations" Type="String">avian
myelocytomatosis viral oncogene homolog|myc proto-oncogene protein|v-myc
avian myelocytomatosis viral oncogene homolog</Item>
<Item Name="NomenclatureSymbol" Type="String">MYC</Item>
<Item Name="NomenclatureName" Type="String">v-myc
myelocytomatosis viral oncogene homolog (avian)</Item>
<Item Name="NomenclatureStatus" Type="String">Official</Item>
<Item Name="TaxID" Type="Integer">9606</Item>
<Item Name="Mim" Type="List">
<Item Name="int" Type="Integer">190080</Item>
</Item>
</DocSum>
I would like search for certain keywords and abstract all gene in this
query that meet the criteria. Can someone recommend a module? I looked
at XML::Simple::DTDReader.
I would be grateful for any help or suggestion.
Thank you,
Kevin
--
Kevin Viel
Department of Genetics [EMAIL PROTECTED]
Southwest Foundation for Biomedical Research phone: (210)258-9884
P.O. Box 760549 fax: (210)258-9444
San Antonio, TX 78245-0549
Kevin Viel
PhD Candidate
Department of Epidemiology
Rollins School of Public Health
Emory University
Atlanta, GA 30322
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