Do you have code fetching data from web resources? I also sometimes get timeout errors on ensembldb and I guess it's because in some unit tests I'm fetching data from the ensembl ftp server.
jo > On 27 Mar 2017, at 18:37, Martin Morgan <martin.mor...@roswellpark.org> wrote: > > On 03/27/2017 12:22 PM, Aimin Yan wrote: >> I am submitting a R package to bioconductor. but I got time out errors when >> I performed R CMD check. >> >> >> Is there a possible way that I can set up time to allow more time for R CMD >> check? Or I have to use examples that they do not cost large time. > > Submitted packages need to conform to package guidelines for space and time > > http://bioconductor.org/developers/package-guidelines/#correctness > > so you'll need to develop realistic examples requiring modest resources. > > Often long-running examples result from inefficient code, so it is > worth-while to profile your code to discover where the most time is spent, > and seek efficient implementations for that section of code either through > better use of vectorization or more sophisticated algorithms. > > Martin > >> >> >> Thank you for your help >> >> Aimin >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > > > This email message may contain legally privileged and/or...{{dropped:2}} > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
