Dear Lluis and Vincent, Thanks for confirming this in other packages.
In the two examples shown, these must be false positives, as the links exist. But also the fact that the warnings only appear in Windows suggests a false positive: I do not understand how this warning would not be triggered in Linux and Mac if the links did not exist. Best, R. On Fri, 06-April-2018, at 16:44:42, Lluís Revilla <lluis.revi...@gmail.com> wrote: > I have recently faced a similar warning. > This is when a link to a help page of another package is broken (there is > not such help page). Although those could be false positives: > mclapply help page does exists in parallel package. > as.MAList does exists in devel limma > > HTH > > On 6 April 2018 at 16:35, Vincent Carey <st...@channing.harvard.edu> wrote: > >> ive seen this too apropos bigrquery on windows >> >> On Fri, Apr 6, 2018 at 10:22 AM Ramon Diaz-Uriarte <rdia...@gmail.com> >> wrote: >> >> > >> > Dear All, >> > >> > Two packages I maintain are showing, in Windows, a warning during check >> > with messages like >> > >> > Rd warning: >> > C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp21WlQD/R.INSTALL23343f935731/ >> OncoSimulR/man/oncoSimulIndiv.Rd:570: >> > file link 'mclapply' in package 'parallel' does not exist and so has been >> > treated as a topic >> > >> > or >> > >> > Rd warning: >> > C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpQfQaA1/R. >> INSTALL1ec81d5b6233/ADaCGH2/man/inputToADaCGH.Rd:45: >> > file link 'as.MAList' in package 'limma' does not exist and so has been >> > treated as a topic >> > >> > >> > >> > that I cannot reproduce under Linux and that I think are false >> > positives. Is there a way to avoid this warning? As far as I can tell, >> > those links really exist. >> > >> > Best, >> > >> > >> > R. >> > >> > -- >> > Ramon Diaz-Uriarte >> > Department of Biochemistry, Lab B-25 >> > Facultad de Medicina >> > Universidad Autónoma de Madrid >> > Arzobispo Morcillo, 4 >> > 28029 Madrid >> > Spain >> > >> > Phone: +34-91-497-2412 >> > >> > Email: rdia...@gmail.com >> > ramon.d...@iib.uam.es >> > >> > http://ligarto.org/rdiaz >> > >> > _______________________________________________ >> > Biocemail@example.com mailing list >> > https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Biocfirstname.lastname@example.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> -- Ramon Diaz-Uriarte Department of Biochemistry, Lab B-25 Facultad de Medicina Universidad Autónoma de Madrid Arzobispo Morcillo, 4 28029 Madrid Spain Phone: +34-91-497-2412 Email: rdia...@gmail.com ramon.d...@iib.uam.es http://ligarto.org/rdiaz _______________________________________________ Biocemail@example.com mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel