Hi, For one of our packages (CopyNumberPlots) we'll need to read 10X CNV data in H5 format. I've read in everything I need except for the cell clustering tree. It's in a format called Z format produced by SciPy hierarchical clustering. The format itself is relatively easy to parse and not so different from hclust return objects so it would be possible to create a small function to translate the Z notation into an hclust object, if needed, but I'll need to figure out the "order" vector, since it's not present in Z.
- Is the Z to hclust function available in any other package? Or something equivalent to that? - If I end up transforming it by hand in a custom function, Is there a function somewhere to compute the order vector in an hclust object? Thanks Bernat _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
