Hi Sokratis, You've address the problems successfully in the devel branch (3.18) but they remain in the release (3.17), so you're probably still getting the messages relating to these builds ( https://bioconductor.org/checkResults/3.17/bioc-LATEST/omada/).
To fix this you'll need to checkout the RELEASE_3_17 branch, and then make the same changes you've already applied. You can either do that via git cherry-pick and select the appropriate commits from devel branch, or perhaps more straightforward is to just copy/paste the relevant sections. Then bump the RELEASE_3_17 version number to 1.2.1 and push that branch. Hopefully this will fix the issues there too. Best, Mike On Thu, 17 Aug 2023 at 03:47, Sokratis Kariotis <sokratiskario...@gmail.com> wrote: > Hey all, > > I can see all is green but I still get messages about failing builds and on > the website shows build error. Do I still have to do something? Thanks in > advance. > > Regards, > Sokratis > > On Thu, Aug 10, 2023 at 2:53 PM Martin Grigorov <martin.grigo...@gmail.com > > > wrote: > > > Hi, > > > > All is green at > > https://bioconductor.org/checkResults/3.18/bioc-LATEST/omada/ > > > > Regards, > > Martin > > > > On Thu, Aug 10, 2023 at 9:44 AM Sokratis Kariotis < > > sokratiskario...@gmail.com> wrote: > > > >> Hey all, > >> > >> Is this fixed now? I think I can see all pass, but on the actual website > >> its still on error. Thanks! > >> > >> Cheers, > >> Sokratis > >> > >> On Tue, Aug 1, 2023 at 4:25 PM Sokratis Kariotis < > >> sokratiskario...@gmail.com> wrote: > >> > >>> Hey, > >>> > >>> I believe I have resolved the conflicts and now can run: *git push > >>> upstream main:devel* > >>> with Everything up-to-date as a result. However, *git push origin main* > >>> does not yield > >>> anything and it keeps hanging without a message. I checked > https://bioconductor.org/checkResults/3.18/bioc-LATEST/omada/ > >>> and the last commit is April. > >>> > >>> > >>> On Mon, Jul 31, 2023 at 10:01 PM Kern, Lori < > >>> lori.sheph...@roswellpark.org> wrote: > >>> > >>>> You'll need to find the merge conflicts and resolve them. Recommit > >>>> those files and then it should go. > >>>> > >>>> Lori Shepherd - Kern > >>>> > >>>> Bioconductor Core Team > >>>> > >>>> Roswell Park Comprehensive Cancer Center > >>>> > >>>> Department of Biostatistics & Bioinformatics > >>>> > >>>> Elm & Carlton Streets > >>>> > >>>> Buffalo, New York 14263 > >>>> ------------------------------ > >>>> *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of > >>>> Sokratis Kariotis <sokratiskario...@gmail.com> > >>>> *Sent:* Monday, July 31, 2023 7:27 AM > >>>> *To:* Martin Grigorov <martin.grigo...@gmail.com> > >>>> *Cc:* bioc-devel@r-project.org <bioc-devel@r-project.org> > >>>> *Subject:* Re: [Bioc-devel] Omada package failing due to removed > >>>> dependency > >>>> > >>>> Tried but its Already up to date. > >>>> > >>>> On Mon, 31 Jul 2023, 7:22 pm Martin Grigorov, < > >>>> martin.grigo...@gmail.com> > >>>> wrote: > >>>> > >>>> > Hi Sokratis, > >>>> > > >>>> > You need to do "git pull --rebase" before trying to push. > >>>> > Most probably the version has been bumped upstream. > >>>> > > >>>> > Regards, > >>>> > Martin > >>>> > > >>>> > On Mon, Jul 31, 2023 at 2:16 PM Sokratis Kariotis < > >>>> > sokratiskario...@gmail.com> wrote: > >>>> > > >>>> >> Hey all, > >>>> >> > >>>> >> I created a new key and now I can commit etc but there is a > conflict > >>>> that > >>>> >> is not allowing me to go ahead. > >>>> >> > >>>> >> My commands: > >>>> >> git add . > >>>> >> git commit -m "Update metrics" > >>>> >> git push upstream main:devel > >>>> >> > >>>> >> *The above results in the following error:* > >>>> >> > >>>> >> > >>>> >> > >>>> >> > >>>> >> > >>>> >> > >>>> >> > >>>> >> > >>>> >> > >>>> >> > >>>> >> > >>>> >> > >>>> >> > >>>> >> *Enumerating objects: 19, done.Counting objects: 100% (17/17), > >>>> done.Delta > >>>> >> compression using up to 16 threadsCompressing objects: 100% > (11/11), > >>>> >> done.Writing objects: 100% (11/11), 4.78 KiB | 4.78 MiB/s, > >>>> done.Total 11 > >>>> >> (delta 7), reused 0 (delta 0), pack-reused 0remote: Error: You > >>>> cannot push > >>>> >> without resolving merge conflicts.remote:remote: Please check the > >>>> files in > >>>> >> the commit pushed to the git-serverremote: for merge conflict > >>>> markers like > >>>> >> '<<<<<<<', '========', '>>>>>>>'.remote:To > >>>> >> git.bioconductor.org:packages/omada ! [remote rejected] main -> > >>>> devel > >>>> >> (pre-receive hook declined)error: failed to push some refs to > >>>> >> 'git.bioconductor.org:packages/omada'* > >>>> >> > >>>> >> > >>>> >> > >>>> >> On Mon, Jul 31, 2023 at 3:36 PM Mike Smith <grimbo...@gmail.com> > >>>> wrote: > >>>> >> > >>>> >> > Hi Sokratis, > >>>> >> > > >>>> >> > Everything in Bioconductor is built around the central > >>>> Bioconductor git > >>>> >> > repositories. The only way to get changes out to users is to > >>>> commit > >>>> >> them > >>>> >> > to git.bioconductor.org and then the build system will pick > those > >>>> up, > >>>> >> run > >>>> >> > the tests and checks, create new versions of packages, and make > >>>> them > >>>> >> > available for distribution. > >>>> >> > > >>>> >> > Perhaps you can include the git command you're running to submit > >>>> the > >>>> >> > changes and a copy of the exact error you're receiving. That > >>>> might help > >>>> >> > the team suggest a solution. > >>>> >> > > >>>> >> > Best regards, > >>>> >> > Mike > >>>> >> > > >>>> >> > On Fri, 28 Jul 2023 at 08:32, Sokratis Kariotis < > >>>> >> > sokratiskario...@gmail.com> wrote: > >>>> >> > > >>>> >> >> Hey both, > >>>> >> >> > >>>> >> >> I have edited the package code but I'm having some difficulties > >>>> >> pushing it > >>>> >> >> to trigger another build (github passphrase). Is there another > >>>> way to > >>>> >> >> trigger the build? Thanks! > >>>> >> >> > >>>> >> >> Cheers, > >>>> >> >> Sokratis > >>>> >> >> > >>>> >> >> On Wed, Jul 12, 2023 at 1:43 AM Kern, Lori < > >>>> >> lori.sheph...@roswellpark.org > >>>> >> >> > > >>>> >> >> wrote: > >>>> >> >> > >>>> >> >> > We can give you a little more time (a few weeks) to fix the > >>>> package > >>>> >> but > >>>> >> >> > please fix as soon as possible to avoid deprecation. > >>>> >> >> > > >>>> >> >> > Cheers, > >>>> >> >> > > >>>> >> >> > Lori Shepherd - Kern > >>>> >> >> > > >>>> >> >> > Bioconductor Core Team > >>>> >> >> > > >>>> >> >> > Roswell Park Comprehensive Cancer Center > >>>> >> >> > > >>>> >> >> > Department of Biostatistics & Bioinformatics > >>>> >> >> > > >>>> >> >> > Elm & Carlton Streets > >>>> >> >> > > >>>> >> >> > Buffalo, New York 14263 > >>>> >> >> > ------------------------------ > >>>> >> >> > *From:* Sokratis Kariotis <sokratiskario...@gmail.com> > >>>> >> >> > *Sent:* Monday, July 10, 2023 10:27 AM > >>>> >> >> > *To:* Kern, Lori <lori.sheph...@roswellpark.org> > >>>> >> >> > *Cc:* Oleksii Nikolaienko <oleksii.nikolaie...@gmail.com>; > >>>> >> >> > bioc-devel@r-project.org <bioc-devel@r-project.org> > >>>> >> >> > *Subject:* Re: [Bioc-devel] Omada package failing due to > removed > >>>> >> >> > dependency > >>>> >> >> > > >>>> >> >> > Hey both, > >>>> >> >> > > >>>> >> >> > I have checked the package license (GPL) and it should be fine > >>>> to use > >>>> >> >> the > >>>> >> >> > code. However, I am having difficulty finding the actual code > to > >>>> >> >> calculate > >>>> >> >> > the internal metrics I am using (used in Omada's function > >>>> >> >> > cluster_voting.R). I can only find the wrapper function but > not > >>>> the > >>>> >> ones > >>>> >> >> > that actually calculate the metrics. I am not sure how to > >>>> proceed > >>>> >> with > >>>> >> >> this > >>>> >> >> > in time, so the Omada package won't get deprecated. > >>>> >> >> > > >>>> >> >> > Regards, > >>>> >> >> > Sokratis > >>>> >> >> > > >>>> >> >> > On Fri, Jul 7, 2023 at 1:03 AM Kern, Lori < > >>>> >> >> lori.sheph...@roswellpark.org> > >>>> >> >> > wrote: > >>>> >> >> > > >>>> >> >> > We would not hunt down the lab especially for CRAN packages, > >>>> but you > >>>> >> >> > could reach out if you like. That would probably be a > >>>> recommended > >>>> >> >> action > >>>> >> >> > to either ask someone from their lab to maintain or if you are > >>>> >> willing > >>>> >> >> and > >>>> >> >> > you really want the package around you could ask the lab if > >>>> they mind > >>>> >> >> you > >>>> >> >> > volunteering to be the new maintainer. > >>>> >> >> > > >>>> >> >> > There could see two options for rewriting/maintaining. > >>>> >> >> > > >>>> >> >> > 1. Take over maintenance of the package and resubmit to CRAN > >>>> >> >> > It's a little tricky cause this is a CRAN package so I'm not > >>>> sure on > >>>> >> >> their > >>>> >> >> > exact policy of taking over an abandoned package. If this is > >>>> >> desired, I > >>>> >> >> > would reach out to CRAN to find out their exact policy > >>>> >> >> > 2. Move needed code to your Bioconductor package > >>>> >> >> > You'll have to check the original package license to make sure > >>>> this > >>>> >> is > >>>> >> >> > allowed under the license of the package. You will still want > >>>> to give > >>>> >> >> the > >>>> >> >> > original authors/maintainer credit. I would say to be safe I > >>>> would > >>>> >> >> include > >>>> >> >> > them as contributors/authors in the DESCRITPION Authors@R > >>>> field and > >>>> >> in > >>>> >> >> > the R code I would add a comment above the code to reference > >>>> original > >>>> >> >> > package citation and stating it was copied from there. I'm > not > >>>> a > >>>> >> >> lawyer or > >>>> >> >> > license/copy right expert so not sure if that would be good > >>>> enough > >>>> >> but > >>>> >> >> that > >>>> >> >> > would be my take on it. > >>>> >> >> > > >>>> >> >> > Lori Shepherd - Kern > >>>> >> >> > > >>>> >> >> > Bioconductor Core Team > >>>> >> >> > > >>>> >> >> > Roswell Park Comprehensive Cancer Center > >>>> >> >> > > >>>> >> >> > Department of Biostatistics & Bioinformatics > >>>> >> >> > > >>>> >> >> > Elm & Carlton Streets > >>>> >> >> > > >>>> >> >> > Buffalo, New York 14263 > >>>> >> >> > ------------------------------ > >>>> >> >> > *From:* Oleksii Nikolaienko <oleksii.nikolaie...@gmail.com> > >>>> >> >> > *Sent:* Thursday, July 6, 2023 1:58 AM > >>>> >> >> > *To:* Sokratis Kariotis <sokratiskario...@gmail.com> > >>>> >> >> > *Cc:* Kern, Lori <lori.sheph...@roswellpark.org>; > >>>> >> >> bioc-devel@r-project.org > >>>> >> >> > <bioc-devel@r-project.org> > >>>> >> >> > *Subject:* Re: [Bioc-devel] Omada package failing due to > removed > >>>> >> >> > dependency > >>>> >> >> > > >>>> >> >> > > >>>> > https://secure-web.cisco.com/1EhksuB6k_yI--kj3_CN8LCovo7wAy9Epj-_8W4VV7FAbktome6nKnRrktDrrzsGXq6OrPZzxo7-CPAnrnZ4mFbi1Z-z81fIELFunE2pI8wuUlGU72f4Irnh1TjSXymZHtkM8_5OEv8EPAA1U7i6tUetGY5G8ZODgjnDQZaarKkEspvU92RNlxjLqzIKy-vIrX-TN-TtC-dDyaqOyIVUNZKJws7sU-V4VFjfkwoM5rK9BAdI4jIqcxygwdSeB5XsZftYZVy7nlTD1Rrp46lnGBMqvfBpVOQjd93wM9KQU1nafzbzIag4rrGGGlr_D4ZWB/https%3A%2F%2Fnonstationarity.sciencesconf.org%2Fresource%2Fpage%2Fid%2F7 > >>>> >> >> > < > >>>> >> >> > >>>> >> > >>>> > https://secure-web.cisco.com/1pCvxIL3lfzw2yMAoq1pXQ5JiavYeyZHI2qtDauHw4xwZZBxaV-dAKGWcVKgwz09vF4YJJGVvkcQloDj0mJOUxj7BI3WPu_1Ze3vDW0a9syxuRsiQNOGsRkJ8BaWBdlxOdRBAw39KujDDGqb_DPfL6IsjHK5UCqoCpzw39GduVcBLFIutoPM8Nqjgp8ArDuh-oK-Bxe-huDYCoLXUX5GyU_fEG81AEtF-osCFtJNLRiQBggrsxcViF8mNihzVj8-UT4cNawHmz7xye_KNs45WZOxnVljiq5QQHuIGCeXRkbYBUvrpcEoTootlVxLloYK0/https%3A%2F%2Fnonstationarity.sciencesconf.org%2Fresource%2Fpage%2Fid%2F7 > >>>> >> >> > > >>>> >> >> > That is, perhaps, not surprising... > >>>> >> >> > > >>>> >> >> > Package seems to be too good to be abandoned. I wonder if > >>>> anyone from > >>>> >> >> > their lab > >>>> >> >> > < > >>>> >> >> > >>>> >> > >>>> > https://secure-web.cisco.com/1IisY82Mh0-7_0tTgq7v7MgjvGFKIBucg15oqE_SNpUPzwuvYYaCPgz427Efo9Xga7j3PYM6msIsM8GJAK7ofsjmhrfAG3_kBGCmTdF0gVYBUz17CdZjNygLUpDMXPSt6h5CfKAjX_SrymhwTWvvEuyH1cH3nCYhVkVd5xfdd2W5azA0g9MJ4bPASnxJwY9quFxu_6CAIuYXkkO_DqiO9NC6Nb22USMev1V4qh5A3IX2kg6l60sRbM9gDQWjNwbJAPSnWq9G5setIw9CNP8avnjON5nhm_cjNhhn6s6kY07wwiSQ4sSQqsekskzOjhbm1/https%3A%2F%2Fmodalx.parisnanterre.fr%2Fmembres > >>>> >> >> > > >>>> >> >> > could take over maintenance, if you still bother to ask... > >>>> >> >> > > >>>> >> >> > Best, > >>>> >> >> > Oleksii > >>>> >> >> > > >>>> >> >> > On Thu, 6 Jul 2023 at 06:23, Sokratis Kariotis < > >>>> >> >> sokratiskario...@gmail.com> > >>>> >> >> > wrote: > >>>> >> >> > > >>>> >> >> > Hey, > >>>> >> >> > > >>>> >> >> > I haven't received any responses from the maintainer of > >>>> ClusterCrit > >>>> >> so I > >>>> >> >> > guess I will have to re-write the code used. How can I > properly > >>>> go > >>>> >> about > >>>> >> >> > this and credit the authors as well? Thanks! > >>>> >> >> > > >>>> >> >> > Cheers, > >>>> >> >> > Sokratis > >>>> >> >> > > >>>> >> >> > On Thu, Jun 29, 2023 at 7:38 PM Kern, Lori < > >>>> >> >> lori.sheph...@roswellpark.org> > >>>> >> >> > wrote: > >>>> >> >> > > >>>> >> >> > We do not allow archived packages to be used. All > dependencies > >>>> must > >>>> >> be > >>>> >> >> on > >>>> >> >> > CRAN or Bioconductor. So yes if you can get them to reinstate > >>>> the > >>>> >> >> package > >>>> >> >> > on CRAN that would be ideal. If not you will have to remove > the > >>>> >> package > >>>> >> >> > from the dependency list and either re-write the code used > >>>> (giving > >>>> >> >> original > >>>> >> >> > clusterCrit authors credit) or remove the functionality used > >>>> from > >>>> >> that > >>>> >> >> > package. > >>>> >> >> > > >>>> >> >> > Lori Shepherd - Kern > >>>> >> >> > > >>>> >> >> > Bioconductor Core Team > >>>> >> >> > > >>>> >> >> > Roswell Park Comprehensive Cancer Center > >>>> >> >> > > >>>> >> >> > Department of Biostatistics & Bioinformatics > >>>> >> >> > > >>>> >> >> > Elm & Carlton Streets > >>>> >> >> > > >>>> >> >> > Buffalo, New York 14263 > >>>> >> >> > ------------------------------ > >>>> >> >> > *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on > >>>> behalf of > >>>> >> >> > Oleksii Nikolaienko <oleksii.nikolaie...@gmail.com> > >>>> >> >> > *Sent:* Thursday, June 29, 2023 5:36 AM > >>>> >> >> > *To:* Sokratis Kariotis <sokratiskario...@gmail.com> > >>>> >> >> > *Cc:* bioc-devel@r-project.org <bioc-devel@r-project.org> > >>>> >> >> > *Subject:* Re: [Bioc-devel] Omada package failing due to > removed > >>>> >> >> > dependency > >>>> >> >> > > >>>> >> >> > Hi, > >>>> >> >> > in this case maybe it's worth reaching out to the maintainer > of > >>>> >> >> > clusterCrit. It was removed from CRAN because of (seems-to-be) > >>>> minor > >>>> >> >> > warnings, which can be addressed by the clusterCrit developer > >>>> in no > >>>> >> >> time... > >>>> >> >> > > >>>> >> >> > Best, > >>>> >> >> > Oleksii > >>>> >> >> > > >>>> >> >> > On Thu, 29 Jun 2023 at 08:44, Sokratis Kariotis < > >>>> >> >> > sokratiskario...@gmail.com> > >>>> >> >> > wrote: > >>>> >> >> > > >>>> >> >> > > Dear Bioconductor team, > >>>> >> >> > > > >>>> >> >> > > I received an email that my package "Omada" is failing in > >>>> release > >>>> >> and > >>>> >> >> > > devel. I had a look and the problem seems to be: *ERROR: > >>>> dependency > >>>> >> >> > > ‘clusterCrit’ is not available for package ‘omada’*. So the > >>>> package > >>>> >> >> > > clusterCrit was removed. Is there a way I can use a archived > >>>> >> version > >>>> >> >> of > >>>> >> >> > it > >>>> >> >> > > (or something similar) so I don't have to rewrite code based > >>>> on new > >>>> >> >> > > packages to avoid potentially inconsistencies? Please > advise, > >>>> thank > >>>> >> >> you! > >>>> >> >> > > > >>>> >> >> > > Cheers, > >>>> >> >> > > Dr. Sokratis Kariotis (PhD) > >>>> >> >> > > Agency for Science, Technology and Research (A*STAR) > >>>> >> >> > > Singapore Immunology Network (SIgN) > >>>> >> >> > > Twitter: @s_kariotis < > >>>> >> >> > > >>>> >> >> > >>>> >> > >>>> > https://secure-web.cisco.com/1EqWv8V2N5hRbw3HmoPEY8RdpEeWxqDoUa71DV8jQUiygXZiRjRxTOSFFWWDUSN7nw3Aviue7E_1xQuvbY4J8O3un4nvR0wtrlQUjMbs1vFGt5o9bI_InwlMvRWb2dhIe9ic0_2ugbdCwXwW_RGN1G4LJxUxm_yO9EkGSnc10bfG2fjit4oALm7Y8gMqnFusMJfqR3j-IKbu0Hem-jPRYXIeAurGmn1l7FvPYk9Pi6MHnOl1RN-5x19R655qOhP8vtsh9q-qwvckAbwuklQvq6lo0zKstGTdB6JkFCIIHswJrur4WrdjGMtwrYkWwOAQs/https%3A%2F%2Ftwitter.com%2Fs_kariotis > >>>> >> >> > > > >>>> >> >> > > LinkedIn: > >>>> >> >> > > >>>> >> >> > >>>> >> > >>>> > http://secure-web.cisco.com/1hrH0VDgCpCKm6BWl_eP9v57iZE2j6Y9RUetJ4RMrKylsFeYV7AWyeBfOewj6SpLxhrD-_JnI4sPdaUJB9Mwxuj-B5ot2FZIu4AU87ty04CdxW8zw9DShqtsaZPm68os9ySeI12kEcN_iujEcY11StQo1_qKeBsQchHO3Vc_qvfAbA2T29jSt4KX0OnG4UZENEfns3cigBqNgiYMOOiCGmz01_nIY5M3cgVbsTmSNA-pov7ZD6si4bOXF6pt-manBCeK0NB13icO5MMlpc8HNxSqkARD7n-R71Sa3ZsGQOIYPgA0uuuIRAR9DbV_F5kSj/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis > >>>> >> >> > > > >>>> >> >> > > [[alternative HTML version deleted]] > >>>> >> >> > > > >>>> >> >> > > _______________________________________________ > >>>> >> >> > > Bioc-devel@r-project.org mailing list > >>>> >> >> > > > >>>> >> >> > > >>>> >> >> > >>>> >> > >>>> > https://secure-web.cisco.com/1CoMZlPPSNe-MfqZkOpNFvpMkwbnIVkEbPIxbET9FKoHMGCVzTeeTdPJGpD4PHivCSzZwalSMt8BeA1_Ab8Pa5gS2jCkg9_onfbYE3UAgbywg5GD1CrAN86qgN8FH4tjTwPBq95yDFIvYCamr14TUrSDkZKUvFhtAw7FR6bpJ_Ub9z2fU6f-G3Xw_FHRqcg6aM9xrpq4GmnfMOKO_Jlf10TJsdvhdReM9Phw2lV_EMy55ZjFYD5bteCpN4_qqRQb4_J6IbFYjlRQEi1A0DiwxC67Gzaf0QPTRszxXRxqPy4oancisQKzNmQJod-2cz9Oa/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel > >>>> >> >> > > > >>>> >> >> > > >>>> >> >> > [[alternative HTML version deleted]] > >>>> >> >> > > >>>> >> >> > _______________________________________________ > >>>> >> >> > Bioc-devel@r-project.org mailing list > >>>> >> >> > > >>>> >> >> > > >>>> >> >> > >>>> >> > >>>> > https://secure-web.cisco.com/1CoMZlPPSNe-MfqZkOpNFvpMkwbnIVkEbPIxbET9FKoHMGCVzTeeTdPJGpD4PHivCSzZwalSMt8BeA1_Ab8Pa5gS2jCkg9_onfbYE3UAgbywg5GD1CrAN86qgN8FH4tjTwPBq95yDFIvYCamr14TUrSDkZKUvFhtAw7FR6bpJ_Ub9z2fU6f-G3Xw_FHRqcg6aM9xrpq4GmnfMOKO_Jlf10TJsdvhdReM9Phw2lV_EMy55ZjFYD5bteCpN4_qqRQb4_J6IbFYjlRQEi1A0DiwxC67Gzaf0QPTRszxXRxqPy4oancisQKzNmQJod-2cz9Oa/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel > >>>> >> >> > > >>>> >> >> > > >>>> >> >> > This email message may contain legally privileged and/or > >>>> confidential > >>>> >> >> > information. If you are not the intended recipient(s), or the > >>>> >> employee > >>>> >> >> or > >>>> >> >> > agent responsible for the delivery of this message to the > >>>> intended > >>>> >> >> > recipient(s), you are hereby notified that any disclosure, > >>>> copying, > >>>> >> >> > distribution, or use of this email message is prohibited. If > >>>> you have > >>>> >> >> > received this message in error, please notify the sender > >>>> immediately > >>>> >> by > >>>> >> >> > e-mail and delete this email message from your computer. Thank > >>>> you. > >>>> >> >> > > >>>> >> >> > > >>>> >> >> > > >>>> >> >> > -- > >>>> >> >> > Cheers, > >>>> >> >> > Sokratis Kariotis > >>>> >> >> > PhD Student > >>>> >> >> > University of Sheffield, Medical School > >>>> >> >> > MedTech > >>>> >> >> > < > >>>> >> >> > >>>> >> > >>>> > https://secure-web.cisco.com/1j_t_6XlNHmK_Mlrd4WRabc9QOpzT2OGES5vH7ZXf-zkhvpeT6fGj6r1c6HMwcYrnxIzGZ6HwikAhhXIh8OkaEgWqigSPXAd_m0NPSjZf7cr7xi4b003k8sYSFAOfwcStP8WCMJQEHURgiHkNDvUmrUdfJYydQO9lMNOyfaP6SnxI2mQX21fOBWIj5wlIAVh9_pBFujbt_XfCBhHL495EtB_s0ntbiowBalE7bhEa4FullCdFTSex4VfICmSriWx91cSPmk1TzmAHv6KZtr7XqAgLH4OzGlGEUTMdjmcrYOoLTC5XpKAljIZMsCwu8hDP/https%3A%2F%2Fwww.facebook.com%2Fmedtechsheffield%2F > >>>> >> >> > > >>>> >> >> > President > >>>> >> >> > Twitter: @s_kariotis > >>>> >> >> > < > >>>> >> >> > >>>> >> > >>>> > https://secure-web.cisco.com/13IN8xWDrADy-iyp1mknOrX5y2tJixhXPBcywL3EoIE7tOUCkSYs7hbAy2slZfzwMH3Bq9AnScXs3HK_KnDOO2kihBQdfM9nIHxnoa1vAkVFfYH8L_ns7w9KGqC0pzUOOxThE_ZMGVWk1LyQyf-RPrv_HY7RqQZo1IEYNirDTKWBu2lkLCH8qvs8lRMm79wx5eRwdZVYNH0uq7g7EcP_vvK9d8vQ534dzt0hOgHaDByQVi2reoXzwifR0pOYP-6LhdI15nbDtZHxMBmTvueysM77gfHBn7_IUHK6y9-biSIidTmH3GlJMkhk83x7UR5Jk/https%3A%2F%2Ftwitter.com%2Fs_kariotis > >>>> >> >> > > >>>> >> >> > LinkedIn: > >>>> > http://secure-web.cisco.com/1nI19pW3ICZ1hk_IVzt7VlU1NDTaT8xDl7lxbbA0_pcu6Krot_h7i4pFmb7XK6HU91_jSzusYJ17TVrz8IKViTCDf7Pi9ghcYil0SE-r4kPMOw69K_lwjejNNpFxoC9zsWBnVOJtmWXbe-_O6T8I7wB3MbwearMr_myd9D3fGhuTnVuFteHLDyYe60b2DE4do9HARpQEdL_K6U--3f0ipONofYwTtfiEphi9VJ2IQ8BE9r6Rref9m_jtc3_ZdSVcOzWNSt3qSQRXtWE-o6A63kf0a92EmMG8h7ERpZChslXjk-6ZWT2sMcsWzi5Odotr_/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis > >>>> >> >> > < > >>>> >> >> > >>>> >> > >>>> > http://secure-web.cisco.com/1h1oCsLmDI6MQdDDyPKrhabJrDBtBogVZA8wMdTLiZENtCtnsB9UQqak12XHMegX9sP0mimjSxawrR5u0VlKLv-D4lrX8u8A05PST1zfXM9VJX6E41Hj2-TOTZm9uOWc8hfxBrCT6UPjQ0X5pFh0sQRgC5tqu2Ks1EALVXZvSixGddS_zQ2C0bQhnc9KLJe8J3jtxPOkUz7QqCjcwpfgixL9ls_ysxmn2OGFxfiMwTmWgUXWcfWwvOXy6OhfeAl_IDK9USdONEsQETuVSgt7f2eVi5DJJBy_4eVwIVz3GV6iTGr2VjRBlh98HxZMAr-iP/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis > >>>> >> >> > > >>>> >> >> > > >>>> >> >> > > >>>> >> >> > This email message may contain legally privileged and/or > >>>> confidential > >>>> >> >> > information. If you are not the intended recipient(s), or the > >>>> >> employee > >>>> >> >> or > >>>> >> >> > agent responsible for the delivery of this message to the > >>>> intended > >>>> >> >> > recipient(s), you are hereby notified that any disclosure, > >>>> copying, > >>>> >> >> > distribution, or use of this email message is prohibited. If > >>>> you have > >>>> >> >> > received this message in error, please notify the sender > >>>> immediately > >>>> >> by > >>>> >> >> > e-mail and delete this email message from your computer. Thank > >>>> you. > >>>> >> >> > > >>>> >> >> > > >>>> >> >> > > >>>> >> >> > -- > >>>> >> >> > Cheers, > >>>> >> >> > Sokratis Kariotis > >>>> >> >> > PhD Student > >>>> >> >> > University of Sheffield, Medical School > >>>> >> >> > MedTech > >>>> >> >> > < > >>>> >> >> > >>>> >> > >>>> > https://secure-web.cisco.com/1EbU56JtxgdwdoJoUZSkRfzViaYzT5UpVv7Wn4bHXpw7_iNUn_et52ACzsUWbzs2Du309DRo4wtQgGcVuDWVIPx5vtUsOovTfb6A-HIBq3NSje0v9lBELQCeYZvBzjm0t2kAdce_aXnf8m3mH7-cYUd0C6Wu2R7erAmQwuoI22clJuDcztgq-JhMyIczKcN_UhCUNAzJ-b_kHKI3mxzoO76dg0N8g2MIp_pHBC3x0rVQno00wElfOCtr3poLLQZwpcZCTPoAQmYs-Dfin4Lwoy2-B9Qn5txtHoCygaeneDxgiTHVOAuILij26i2Q9cgAQ/https%3A%2F%2Fwww.facebook.com%2Fmedtechsheffield%2F > >>>> >> >> > > >>>> >> >> > President > >>>> >> >> > Twitter: @s_kariotis > >>>> >> >> > < > >>>> >> >> > >>>> >> > >>>> > https://secure-web.cisco.com/1RhhMUBj_mRXVHCOKQB6We-WITw332tSjBMu7_BVsJxiUs4tE1EO3zyDwMwygB4WIh8AaEo6gPZZcTCl81Qy6PrClu7SxtC3TbzSz30XZlzOjZukAKbowWtBHiJ36lG-a4U_5dYeM6CKUfdb7MaXesg8oLlZscBYO4fVVKMdcjn0NvtsvF-RfOVtu8tVFiOw6yvb3Rt1g-2xPBcrCEEn69L2z59SnUHY8pboO84aP6YBHHPhMHXw1Quz5J7KfGN3qlcX3kehRg0RIISJKLCdu87PnMhtcbODE0T15xmjyc1mUYKmjlmwghgZF4m-UzFoP/https%3A%2F%2Ftwitter.com%2Fs_kariotis > >>>> >> >> > > >>>> >> >> > LinkedIn: > >>>> > http://secure-web.cisco.com/1nI19pW3ICZ1hk_IVzt7VlU1NDTaT8xDl7lxbbA0_pcu6Krot_h7i4pFmb7XK6HU91_jSzusYJ17TVrz8IKViTCDf7Pi9ghcYil0SE-r4kPMOw69K_lwjejNNpFxoC9zsWBnVOJtmWXbe-_O6T8I7wB3MbwearMr_myd9D3fGhuTnVuFteHLDyYe60b2DE4do9HARpQEdL_K6U--3f0ipONofYwTtfiEphi9VJ2IQ8BE9r6Rref9m_jtc3_ZdSVcOzWNSt3qSQRXtWE-o6A63kf0a92EmMG8h7ERpZChslXjk-6ZWT2sMcsWzi5Odotr_/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis > >>>> >> >> > < > >>>> >> >> > >>>> >> > >>>> > http://secure-web.cisco.com/1QlRJ-HwDhYoeQZGt2FCzKpzCEleTeJuBprI0G9qystL3HbJH4unSUkFhwBB5vlm1EWz9u50EG4S0Xnv38OXhu3-ioroUBcS0KG6x7V3cFf73lNR3mJnwnqVqzPtq9gIMtUxwnPPzS6sHVbJhDi2CyejXNt0HoO5oRi4T3Ruca3MN7ZxxXJd2gbyGVGryXBDFLrVBlg3KZ-3_m8AFoTvBpUvWv7fs0vGBQ2lWUXSoQ7JYARZ0vy5mW0a4kK2EzbxCWaOFLR6JcbDwA3T9BO006AtSM2onHVqveK_jx2VZB6CvZsLrR-VJ4j41A8IvYfuQ/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis > >>>> >> >> > > >>>> >> >> > > >>>> >> >> > This email message may contain legally privileged and/or > >>>> confidential > >>>> >> >> > information. If you are not the intended recipient(s), or the > >>>> >> employee > >>>> >> >> or > >>>> >> >> > agent responsible for the delivery of this message to the > >>>> intended > >>>> >> >> > recipient(s), you are hereby notified that any disclosure, > >>>> copying, > >>>> >> >> > distribution, or use of this email message is prohibited. If > >>>> you have > >>>> >> >> > received this message in error, please notify the sender > >>>> immediately > >>>> >> by > >>>> >> >> > e-mail and delete this email message from your computer. Thank > >>>> you. > >>>> >> >> > > >>>> >> >> > >>>> >> >> > >>>> >> >> -- > >>>> >> >> Cheers, > >>>> >> >> Sokratis Kariotis > >>>> >> >> PhD Student > >>>> >> >> University of Sheffield, Medical School > >>>> >> >> MedTech < > >>>> > https://secure-web.cisco.com/1UZJHpVQsI8BfFPWhbq-J2rDlzAewQvgrzEc9WGdF_0K0yiBiLf-It8lbnJnE8RsNZOScd3XkvYSJDp2BZEA9qQ9SiKToJsRHBxjK2bfZLmwCkERBcmUFd9SdoMoB1G4RpEYZFB-1xVSxAPfdiIt_Y4pwfTBtitLHh35siIHmmWTxxGRMgWsScGr5LH7uzLXpK2aU1CTuzOreG-QdW1lDSHVyqJ3QZFGcdCaZ8o8f2qfBdk3hp6oJ7YYYPkFS_RJhwUgAJLPzKq_WYmrO-LvFJowXv0kL7-wJl2HP9iF0xxNvcUL0efR4AUskq7ASlnDR/https%3A%2F%2Fwww.facebook.com%2Fmedtechsheffield%2F > >>>> >President > >>>> >> >> Twitter: @s_kariotis < > >>>> > https://secure-web.cisco.com/1wN6YWZ6TrhzA9-XXGwx2WH2adnYr6vcYZGm8DxTnJrVaf7YW-KRmE5ab_OSDfDVhgUW8-M1VUejquNFC3yAsUPME7S2r9j6tBNjLXFYXx8J9c7lM4zLP2wNEVZHJygxBPw07YN2qNuIgs3YofrxLiuV7448HJFjJ09yH48V9eyA7ztDFZRSEn7nQ9a_O7CKAqXvrPZMdXLYF4kDU_zF9fEIk_NR6ZufkBhNCGOhwZR4_BEAMgWPOP0GLYCw4cUOFpwIqJVyIBXHS6e2UQxY1SyxWqVcXkVU777qXzLQq5EKhFRgT-rCDt1yMB1edLRci/https%3A%2F%2Ftwitter.com%2Fs_kariotis > >>>> > > >>>> >> >> LinkedIn: > >>>> > http://secure-web.cisco.com/1nI19pW3ICZ1hk_IVzt7VlU1NDTaT8xDl7lxbbA0_pcu6Krot_h7i4pFmb7XK6HU91_jSzusYJ17TVrz8IKViTCDf7Pi9ghcYil0SE-r4kPMOw69K_lwjejNNpFxoC9zsWBnVOJtmWXbe-_O6T8I7wB3MbwearMr_myd9D3fGhuTnVuFteHLDyYe60b2DE4do9HARpQEdL_K6U--3f0ipONofYwTtfiEphi9VJ2IQ8BE9r6Rref9m_jtc3_ZdSVcOzWNSt3qSQRXtWE-o6A63kf0a92EmMG8h7ERpZChslXjk-6ZWT2sMcsWzi5Odotr_/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis > >>>> >> >> > >>>> >> >> [[alternative HTML version deleted]] > >>>> >> >> > >>>> >> >> _______________________________________________ > >>>> >> >> Bioc-devel@r-project.org mailing list > >>>> >> >> > >>>> > https://secure-web.cisco.com/1omxEHTcWtl70OI-olS1ZqcaCRnJ4Fn7rAOZql6D3Es1hQNXpincALWN16-MMRS_hcYMa7XUNWNQCDWa-yJRM9Or1QqEitc7eAog1lECwY8yt_AjStJOHx8TUjutJBmCBaHIs1nbvB72Xyq14CUD4hILYXxa5J9qaf6apAoHsaFb_le9kNegFnRdgd_7WnA4h4cLPzFKSGX8j_U9d9oi2YM_-o-LEuaPDyIoQFXJIlocCu-LFEdEXKtbxWR6MoieJHYi6HiiP8-P2z9lq9gzD1ouLSRo2a727ohZSf1SFNkG-fj_b-K2Sas8AxSr_eh2z/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel > >>>> >> >> > >>>> >> > > >>>> >> > >>>> >> -- > >>>> >> Cheers, > >>>> >> Sokratis Kariotis > >>>> >> PhD Student > >>>> >> University of Sheffield, Medical School > >>>> >> MedTech < > >>>> > https://secure-web.cisco.com/1UZJHpVQsI8BfFPWhbq-J2rDlzAewQvgrzEc9WGdF_0K0yiBiLf-It8lbnJnE8RsNZOScd3XkvYSJDp2BZEA9qQ9SiKToJsRHBxjK2bfZLmwCkERBcmUFd9SdoMoB1G4RpEYZFB-1xVSxAPfdiIt_Y4pwfTBtitLHh35siIHmmWTxxGRMgWsScGr5LH7uzLXpK2aU1CTuzOreG-QdW1lDSHVyqJ3QZFGcdCaZ8o8f2qfBdk3hp6oJ7YYYPkFS_RJhwUgAJLPzKq_WYmrO-LvFJowXv0kL7-wJl2HP9iF0xxNvcUL0efR4AUskq7ASlnDR/https%3A%2F%2Fwww.facebook.com%2Fmedtechsheffield%2F > >>>> >President > >>>> >> Twitter: @s_kariotis < > >>>> > https://secure-web.cisco.com/1wN6YWZ6TrhzA9-XXGwx2WH2adnYr6vcYZGm8DxTnJrVaf7YW-KRmE5ab_OSDfDVhgUW8-M1VUejquNFC3yAsUPME7S2r9j6tBNjLXFYXx8J9c7lM4zLP2wNEVZHJygxBPw07YN2qNuIgs3YofrxLiuV7448HJFjJ09yH48V9eyA7ztDFZRSEn7nQ9a_O7CKAqXvrPZMdXLYF4kDU_zF9fEIk_NR6ZufkBhNCGOhwZR4_BEAMgWPOP0GLYCw4cUOFpwIqJVyIBXHS6e2UQxY1SyxWqVcXkVU777qXzLQq5EKhFRgT-rCDt1yMB1edLRci/https%3A%2F%2Ftwitter.com%2Fs_kariotis > >>>> > > >>>> >> LinkedIn: > >>>> > http://secure-web.cisco.com/1nI19pW3ICZ1hk_IVzt7VlU1NDTaT8xDl7lxbbA0_pcu6Krot_h7i4pFmb7XK6HU91_jSzusYJ17TVrz8IKViTCDf7Pi9ghcYil0SE-r4kPMOw69K_lwjejNNpFxoC9zsWBnVOJtmWXbe-_O6T8I7wB3MbwearMr_myd9D3fGhuTnVuFteHLDyYe60b2DE4do9HARpQEdL_K6U--3f0ipONofYwTtfiEphi9VJ2IQ8BE9r6Rref9m_jtc3_ZdSVcOzWNSt3qSQRXtWE-o6A63kf0a92EmMG8h7ERpZChslXjk-6ZWT2sMcsWzi5Odotr_/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis > >>>> >> > >>>> >> [[alternative HTML version deleted]] > >>>> >> > >>>> >> _______________________________________________ > >>>> >> Bioc-devel@r-project.org mailing list > >>>> >> > >>>> > https://secure-web.cisco.com/1omxEHTcWtl70OI-olS1ZqcaCRnJ4Fn7rAOZql6D3Es1hQNXpincALWN16-MMRS_hcYMa7XUNWNQCDWa-yJRM9Or1QqEitc7eAog1lECwY8yt_AjStJOHx8TUjutJBmCBaHIs1nbvB72Xyq14CUD4hILYXxa5J9qaf6apAoHsaFb_le9kNegFnRdgd_7WnA4h4cLPzFKSGX8j_U9d9oi2YM_-o-LEuaPDyIoQFXJIlocCu-LFEdEXKtbxWR6MoieJHYi6HiiP8-P2z9lq9gzD1ouLSRo2a727ohZSf1SFNkG-fj_b-K2Sas8AxSr_eh2z/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel > >>>> >> > >>>> > > >>>> > >>>> [[alternative HTML version deleted]] > >>>> > >>>> _______________________________________________ > >>>> Bioc-devel@r-project.org mailing list > >>>> > >>>> > https://secure-web.cisco.com/1omxEHTcWtl70OI-olS1ZqcaCRnJ4Fn7rAOZql6D3Es1hQNXpincALWN16-MMRS_hcYMa7XUNWNQCDWa-yJRM9Or1QqEitc7eAog1lECwY8yt_AjStJOHx8TUjutJBmCBaHIs1nbvB72Xyq14CUD4hILYXxa5J9qaf6apAoHsaFb_le9kNegFnRdgd_7WnA4h4cLPzFKSGX8j_U9d9oi2YM_-o-LEuaPDyIoQFXJIlocCu-LFEdEXKtbxWR6MoieJHYi6HiiP8-P2z9lq9gzD1ouLSRo2a727ohZSf1SFNkG-fj_b-K2Sas8AxSr_eh2z/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel > >>>> > >>>> > >>>> This email message may contain legally privileged and/or confidential > >>>> information. If you are not the intended recipient(s), or the > employee or > >>>> agent responsible for the delivery of this message to the intended > >>>> recipient(s), you are hereby notified that any disclosure, copying, > >>>> distribution, or use of this email message is prohibited. If you have > >>>> received this message in error, please notify the sender immediately > by > >>>> e-mail and delete this email message from your computer. Thank you. > >>>> > >>> > >>> > >>> -- > >>> Cheers, > >>> Sokratis Kariotis > >>> PhD Student > >>> University of Sheffield, Medical School > >>> MedTech <https://www.facebook.com/medtechsheffield/>President > >>> Twitter: @s_kariotis <https://twitter.com/s_kariotis> > >>> LinkedIn: http://www.linkedin.com/in/sokratiskariotis > >>> > >> > >> > >> -- > >> Cheers, > >> Sokratis Kariotis > >> PhD Student > >> University of Sheffield, Medical School > >> MedTech <https://www.facebook.com/medtechsheffield/>President > >> Twitter: @s_kariotis <https://twitter.com/s_kariotis> > >> LinkedIn: http://www.linkedin.com/in/sokratiskariotis > >> > > > > -- > Cheers, > Sokratis Kariotis > PhD Student > University of Sheffield, Medical School > MedTech <https://www.facebook.com/medtechsheffield/>President > Twitter: @s_kariotis <https://twitter.com/s_kariotis> > LinkedIn: http://www.linkedin.com/in/sokratiskariotis > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
