Wolfgang Huber <[EMAIL PROTECTED]> writes: > Hi, > > As discussed in Seattle, here is a link to existing efforts for > agreeing what is "Minimal Information about a High Throughput > Sequencing Experiment" > > http://uhts.lbl.gov/index.php/Main_Page > http://uhts.lbl.gov/images/2/2a/MINSEQE.pdf > > with a view that we might want to make our infrastructures compatible, > and possibly participate in that discussion. > > In the good tradition of MIAME, this is a conceptual description, not > a file format or alike.
One challenge is how to coordinate MINSEQE information with the data. The data seems too big to maintain in an R object, so the data and its metadata are decoupled and the entire object fragile. Martin > Best wishes > Wolfgang > > ------------------------------------------------------------------ > Wolfgang Huber EBI/EMBL Cambridge UK http://www.ebi.ac.uk/huber > > _______________________________________________ > Bioc-sig-sequencing mailing list > [email protected] > https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing -- Martin Morgan Computational Biology / Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109 Location: Arnold Building M2 B169 Phone: (206) 667-2793 _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
