"James W. MacDonald" <[email protected]> writes: > Is there a method to convert the Solexa quality values in a ShortReadQ > object to numeric?
> exammple(readFastq) [snip] > rfq class: ShortReadQ length: 256 reads; width: 36 cycles > dim(as(quality(rfq), "matrix")) [1] 256 36 > typeof(as(quality(rfq), "matrix")) [1] "integer" Martin > Best, > > Jim > > > -- > James W. MacDonald, M.S. > Biostatistician > Hildebrandt Lab > 8220D MSRB III > 1150 W. Medical Center Drive > Ann Arbor MI 48109-5646 > 734-936-8662 > > _______________________________________________ > Bioc-sig-sequencing mailing list > [email protected] > https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing -- Martin Morgan Computational Biology / Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109 Location: Arnold Building M2 B169 Phone: (206) 667-2793 _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
