I just wanted to draw people's attention to the Rolexa BioC package, which is produced by Jacques Rougemont and his colleagues at Bioinformatics & Biostatistics Core Facility, EPFL School of Life Sciences, Lausanne, Switzerland. It provides an mclust (i.e. model-based) alternative to Bustard in the Solexa data analysis pipeline and fits within the IRanges/Biostrings/ShortRead BioC framework. For more information on this package see

http://bioconductor.org/packages/2.5/bioc/html/Rolexa.html


Cheers,
Patrick

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