I just wanted to draw people's attention to the Rolexa BioC package,
which is produced by Jacques Rougemont and his colleagues at
Bioinformatics & Biostatistics Core Facility, EPFL School of Life
Sciences, Lausanne, Switzerland. It provides an mclust (i.e.
model-based) alternative to Bustard in the Solexa data analysis pipeline
and fits within the IRanges/Biostrings/ShortRead BioC framework. For
more information on this package see
http://bioconductor.org/packages/2.5/bioc/html/Rolexa.html
Cheers,
Patrick
_______________________________________________
Bioc-sig-sequencing mailing list
[email protected]
https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing