Hello everybody, Is there any memory efficient way to consolidate multiple AlignedRead objects into one?
Example: Lets say that I have 10 AlignedRead instances, 10 million tags each. Lets call those instances aln01 through aln10. I can consolidate two of them like this: aln <- append(aln01, aln02) Can I consolidate all AlignRead instances in a single shot? Something like this: aln <- superDuperConsolidator(aln01, aln02, aln03, ..., aln10) Thank you, Ivan ######################################################### > sessionInfo() R version 2.10.0 Under development (unstable) (2009-08-12 r49169) x86_64-unknown-linux-gnu locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] ShortRead_1.3.27 lattice_0.17-25 BSgenome_1.13.10 Biostrings_2.13.34 [5] IRanges_1.3.60 loaded via a namespace (and not attached): [1] Biobase_2.5.5 grid_2.10.0 hwriter_1.1 ######################################################### Ivan Gregoretti, PhD National Institute of Diabetes and Digestive and Kidney Diseases National Institutes of Health 5 Memorial Dr, Building 5, Room 205. Bethesda, MD 20892. USA. Phone: 1-301-496-1592 Fax: 1-301-496-9878 _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
