Hi,
I'm encountering the following error when trying to load fastq file:
Error in .local(dirPath, pattern, ...) :
_DNAencode(): key 73 not in lookup table
Key 73 in ascii table is "I" (capital i)
Anyone had encountered such error before ?
Thanks in advance for your help
Regards,
Ramzi
> sessionInfo()
R version 2.10.1 (2009-12-14)
x86_64-pc-linux-gnu
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] biomaRt_2.2.0 ShortRead_1.4.0 lattice_0.18-3
BSgenome_1.14.2
[5] Biostrings_2.14.12 IRanges_1.4.11
loaded via a namespace (and not attached):
[1] Biobase_2.6.1 grid_2.10.1 hwriter_1.1 RCurl_1.3-1 XML_2.6-0
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