Trying to duplicate the example in the goseq vignette:
> table.summary = read.table("Li_sum.txt", sep = "\t", stringsAsFactors =
> FALSE, header = TRUE)
Error in file(file, "rt") : cannot open the connection
In addition: Warning message:
In file(file, "rt") :
cannot open file 'Li_sum.txt': No such file or directory
> sessionInfo()
R version 2.10.1 Patched (2010-01-25 r51042)
x86_64-apple-darwin9.8.0
locale:
[1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] mgcv_1.6-1 edgeR_1.4.7 goseq_0.1.5 BiasedUrn_1.03
loaded via a namespace (and not attached):
[1] grid_2.10.1 lattice_0.18-3 limma_3.2.1 Matrix_0.999375-33
nlme_3.1-96 tools_2.10.1
>
Thanks for your help
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