Hi, I would like get suggestions on what is the best way to do this. I have a "SimpleRleList" object, in which the range coordinates are relevant to an ensembl transcript (ranges from 1 to the total length of the transcript). I would like to show my data on the UCSC browser, so I need to map those coordinates to the genome. Currenty I wrote my own script to do this, based on the exon locations from biomart. There got to be an easy way to do this, but don't seem to find a quick answer. Sorry if this has been answered.
Thanks. Jason _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
