Hi Ramzi Temanni,
I met the same problem with you when running shortread. As Martin
mentioned, there is one new line missing after the last file record. How
did you fix this problem? I do not know how to add a new line after the
last line. My data is fastq file, I just filtered the reads which
contain N by using the nFilter function in shortread package.
Many thanks in advance!
Wei
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