Hi Dario, If possible, could you please share your insight on the use case for distinguishing peaks at + strand from those at - strand? Thanks!
I have several deadlines coming next week. I will try to work on the new feature the week after. Thanks! Best regards, Julie ******************************************* Lihua Julie Zhu, Ph.D Research Associate Professor Program in Gene Function and Expression Program in Molecular Medicine University of Massachusetts Medical School 364 Plantation Street, Room 613 Worcester, MA 01605 508-856-5256 http://www.umassmed.edu/pgfe/faculty/zhu.cfm On 6/3/10 11:26 PM, "Dario Strbenac" <[email protected]> wrote: > Hi, > > Would it be possible to have an extra choice for the PeakLocForDistance option > of the annotatePeakInBatch function ? A choice that uses the start if the peak > is on the + strand, and end if the peak is on the - strand (if the peaks have > a strand) ? > > -------------------------------------- > Dario Strbenac > Research Assistant > Cancer Epigenetics > Garvan Institute of Medical Research > Darlinghurst NSW 2010 > Australia > > _______________________________________________ > Bioc-sig-sequencing mailing list > [email protected] > https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing > _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
