Hi,
I've been on a long long vacation, so I'm a bit more out of the loop
than I usually am.
I've been using RangedData a lot in my code until now to represent
sets of genomic regions spread over multiple chromosomes, and I've
just realized that GenomicRanges has a lot of the same characteristics.
I wanted to ask you all
- whether RangedData and GenomicRanges are pretty much equivalent, or
if there are functions that exist for one but not the other?
- whether I can use pretty much the same code and functions if I
switch everything over to use GenomicRanges?
- are there subtle differences I should be careful of if I make the
switch?
thanks very much,
Janet Young
-------------------------------------------------------------------
Dr. Janet Young (Trask lab)
Fred Hutchinson Cancer Research Center
1100 Fairview Avenue N., C3-168,
P.O. Box 19024, Seattle, WA 98109-1024, USA.
tel: (206) 667 1471 fax: (206) 667 6524
email: jayoung ...at... fhcrc.org
http://www.fhcrc.org/labs/trask/
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