No there is no support for colorspace encoded reads. Martin
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Martin Morgan
On Nov 11, 2010, at 11:38 AM, [email protected] wrote:
Hello list,
Can scanBam() be used with AB SOLID data (bam files) so that it can
return sequences in color space and with the right lengths?
My read sequences are 50 bp in lengths however scanBam() is
returning sequences of length between 25 - 27 (they seem to be
clipped) and which are not in color space.
Many thanks for any suggestions,
Ivan
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