Hello,
I have a GRangesList and some of the GRanges elements of it are replicates that
I'd like to pool together. I can't get the c() to work with GRanges that are in
a GRangesList.
> summary(IPlist)
Length Class Mode
8 GRangesList S4
> tmp <- do.call(c, IPlist[1:2])
Error in do.call(c, IPlist[1:2]) : second argument must be a list
Is there a smarter way of achieving my use case than using c() ? I've got
GenomicRanges 1.2.1.
Note that it also doesn't work if I have a standard list of GRanges.
> tmpList <- as.list(IPlist)
> tmp <- do.call(c, tmpList[1:2])
> length(tmp)
[1] 2
Thanks,
Dario.
--------------------------------------
Dario Strbenac
Research Assistant
Cancer Epigenetics
Garvan Institute of Medical Research
Darlinghurst NSW 2010
Australia
_______________________________________________
Bioc-sig-sequencing mailing list
[email protected]
https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
