Hi, I'm afraid my previous reply was unhelpful, the Affymetrix alignments are for the consensus/exemplar sequences, so would probably give the same genomic coordinates for all the probe sets.
The UCSC genome browser has tracks for the genomic alignments of the HG-U133 Plus 2 probes. You can download the underlying data from http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/affyU133Plus2.txt.gz or the affyU133Plus2.sql file. Best wishes, Maria _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
