Dear Dr. Raghava,

One basic problem I want to discuss here is:  biological problems are often
specific to particular organism. But most bioinformatics tools are generic.
Suppose you are finding a motif in the gene seq of an Organism X and
Organism Y, mostly you use the same tool (for example MEME), but every
organism has different requirements for finding the motifs for that the
biology of that organism has to studied in great detail, rules the motif in
that Organism is following has to be ascertained and the same has to be
mathematically addressed. I think this will lead to making a tool which has
to very flexible to accomodate all this. Like there is the concept of
personalized medicine we should have a generic tool which can
be molded for specific problem. This can be the beginning.

Satya Swarup Samal
B. Tech. Bioinformatics


2009/12/7 Raghava <[email protected]>

> Dear Colleagues
> It is important for all bioinformaticians to know the need of
> biologist as our major role is to assist biologist in solving their
> problem. There is a need of better coordination between user
> (biologist) and service providers (bioinformaticians). Please give
> your input, your input is important for the development of the field.
> Our group is working in the filed of bioinodmatics (
> http://www.imtech.res.in.raghava/
> ). We are interested to know the trend in bioinformatics, I mean what
> are the hot problems one should address. We have capability to
> develop
> databases, software and web services, we wish to address new and
> challenging problems.
>  I will highly appreciate if members of this group suggest major
> challenges faced by researchers working in the filed of biology/
> pharma
> which bioinformaticians can
> address.  Thanks for your help.
> Raghava
> ======================================================
> # Dr G P S Raghava (FASc, FNASc), Head Bioinformatics Centre   #
> # Institute of Microbial Technology, Sector-39A, Chandigarh, India  #
> # Phone: +91-172-2690557, Fax: +91-172-2690632
> #
> # Eadd: http://www.imtech.res.in/raghava/   [email protected] #
> #=====================================================
>
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-- 
Best,
Satya S. Samal

-- 
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