On Thu, Jan 26, 2012 at 11:42 PM, Felipe Almeida Lessa <felipe.le...@gmail.com> wrote: > - Fast enough: the streaming interface achieves 12 MiB/s for parsing, > which is pretty nice considering that there are some known overheads > on its implementation.
I've just released biostockholm 0.2.1 which uses conduit 0.2. Now the streaming interface achieves 31 MiB/s when parsing Rfam 9.1's full data on my computer, which is a 2.6x increase in performance! Kudos to Michael Snoyman who squashed the biggest "known overhead" that I've mentioned above on this new conduit 0.2 release. Cheers! =) -- Felipe. _______________________________________________ Biohaskell mailing list Biohaskell@biohaskell.org http://malde.org/cgi-bin/mailman/listinfo/biohaskell
