I've uploaded a 'biofasta' library to Hackage. It's derived from the
Bio.Sequence.Fasta module from the old monolithic biolib.
I've removed some functionality from it in an effort to get it built and
uploaded as quickly and easily as possible. I removed the functions for
dealing with quality data because I was having difficulty reconciling
them with the 'Sequence' data type.
The only fasta files that I use with quality values are fastq files, so
I just don't personally have use for that functionality but I'd be happy
to add it back in if others see how to do it.
Dan
P.S. I've mentioned before that I'm a self-taught programmer. This
process of refactoring these libraries has been educational for me, but
I do want to make sure that I'm not breaking things for other people, so
if anyone has a bit of time to check that I'm making sane design choices
then please do so and let me know if you have any advice.
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