Hello, here is my blog post for the 5th coding week: http://biohaskell.org/GSoC_blog/Week_5 . In the last week, I changed the use of lists to boxed vectors and then to unboxed vectors and I did some profiling in between. Here you can find the profiling statistics: http://biohaskell.org/GSoC_blog/Weeks_3and4 .
This week, I will try to do some more changes in the programm such that there will be an improvement in the running time, e.g. try avoid using 'cons' with vectors. Have a nice week, Sarah