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Sean


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From: Cold Spring Harbor Laboratory Meetings & Courses <[email protected]>
Date: Wed, Jan 2, 2019 at 7:00 AM
Subject: High-Throughput Biology: From Sequence to Networks CSHL Course
March 2019
To: <[email protected]>


<http://r20.rs6.net/tn.jsp?f=001CpRpNVgu-cG4hap-8PuaPeGwvTLmi4doID7fapwqFhmFlYBKRrW3kryBDrwGqFuO8CU28J7x3sbtCVjBDbk2wIgYzBY5mPNTFlT9D806G13x56sAMuTiDDj_ZoITUTG1j2CB9VXvFg7KcZ3NHniAvbc4Sy_p-lSK_5Y41F0h4BGzteaTMj396YKE2FZ0KtEhGRhdceaZi_Y=&c=5-LLmPhCyMeE-73bawJQWe6Qyb68IgrqKKWYk4UlQnxK-vkGgUzmoA==&ch=ag8Qra_wb1hyY4LPlGMCpXnJkDafgMHTLY2SoTmKTxrirQy2AjN6XQ==>
High-Throughput Biology: From Sequence to Networks
<http://r20.rs6.net/tn.jsp?f=001CpRpNVgu-cG4hap-8PuaPeGwvTLmi4doID7fapwqFhmFlYBKRrW3kryBDrwGqFuO8CU28J7x3sbtCVjBDbk2wIgYzBY5mPNTFlT9D806G13x56sAMuTiDDj_ZoITUTG1j2CB9VXvFg7KcZ3NHniAvbc4Sy_p-lSK_5Y41F0h4BGzteaTMj396YKE2FZ0KtEhGRhdceaZi_Y=&c=5-LLmPhCyMeE-73bawJQWe6Qyb68IgrqKKWYk4UlQnxK-vkGgUzmoA==&ch=ag8Qra_wb1hyY4LPlGMCpXnJkDafgMHTLY2SoTmKTxrirQy2AjN6XQ==>
March 11 - 17, 2019
Applications Due: January 15, 2019
In collaboration with the Canadian Bioinformatics Workshops
<http://r20.rs6.net/tn.jsp?f=001CpRpNVgu-cG4hap-8PuaPeGwvTLmi4doID7fapwqFhmFlYBKRrW3kryBDrwGqFuO4177EDsLeh6pXeJc-vpkuaryTaXgNdGtzLEKDLnpXYtSZ6rKZtKK22K8CXbLGAnuqAoLEK75g5UVfGH0b-lMAw==&c=5-LLmPhCyMeE-73bawJQWe6Qyb68IgrqKKWYk4UlQnxK-vkGgUzmoA==&ch=ag8Qra_wb1hyY4LPlGMCpXnJkDafgMHTLY2SoTmKTxrirQy2AjN6XQ==>
Lead Instructors
Francis Oullette, Genome Quebec
Ann Meyer, Ontario Institute for Cancer Research
With the introduction of next-generation sequencing platforms, it is now
feasible to use high-throughput sequencing approaches to address many
research questions. Now more than ever, it is crucial to know what
bioinformatic tools and resources are available, and it is necessary to
develop informatic skills to analyze high-throughput data using those
tools. The Canadian Bioinformatics Workshops (CBW), in collaboration with
Cold Spring Harbor Laboratory, has developed a comprehensive seven-day
course covering key bioinformatics concepts and tools required to analyze
DNA- and RNA-sequence reads using a reference genome. This course combines
the material and concepts from three established CBW workshops; see a full
outline here
<http://r20.rs6.net/tn.jsp?f=001CpRpNVgu-cG4hap-8PuaPeGwvTLmi4doID7fapwqFhmFlYBKRrW3kryBDrwGqFuOrEIpiuNlBM3GCb1NOf9B2JQW9mPrglr7rdbHOY9PR3K7uvdX02jrcTg9DPjcI_IjIGCYwuf8yl2xGD_hO6-WQAvfOR9SuPK6_uwRGSS1UNskDjLoKXu7tlI2GUYDd9xjvEpeazpy8JFRIvAgow1Ls88_ppxPS_cw&c=5-LLmPhCyMeE-73bawJQWe6Qyb68IgrqKKWYk4UlQnxK-vkGgUzmoA==&ch=ag8Qra_wb1hyY4LPlGMCpXnJkDafgMHTLY2SoTmKTxrirQy2AjN6XQ==>
.

The course will begin with the workflow involved in moving from platform
images to sequence generation, after which participants will gain practical
skills for evaluating sequence read quality, mapping reads to a reference
genome, and analyzing sequence reads for variation and expression level.
The course will conclude with pathway and network analysis on the resultant
'gene' list. Participants will gain experience in cloud computing and data
visualization tools. All class exercises will be self-contained units that
include example data (e.g., Illumina paired-end data) as well as detailed
instructions for installing all required bioinformatics tools.
Please click this link to go to the High-Throughput Biology: From Sequence
to Networks course website for more info.
<http://r20.rs6.net/tn.jsp?f=001CpRpNVgu-cG4hap-8PuaPeGwvTLmi4doID7fapwqFhmFlYBKRrW3kryBDrwGqFuO8CU28J7x3sbtCVjBDbk2wIgYzBY5mPNTFlT9D806G13x56sAMuTiDDj_ZoITUTG1j2CB9VXvFg7KcZ3NHniAvbc4Sy_p-lSK_5Y41F0h4BGzteaTMj396YKE2FZ0KtEhGRhdceaZi_Y=&c=5-LLmPhCyMeE-73bawJQWe6Qyb68IgrqKKWYk4UlQnxK-vkGgUzmoA==&ch=ag8Qra_wb1hyY4LPlGMCpXnJkDafgMHTLY2SoTmKTxrirQy2AjN6XQ==>
Cold Spring Harbor Laboratory - Meetings & Courses | 1 Bungtown Road, Cold
Spring Harbor, NY 11724
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Sent by [email protected]


-- 
Sean Davis, MD, PhD
Center for Cancer Research
National Cancer Institute
National Institutes of Health
Bethesda, MD 20892
https://seandavi.github.io/
https://twitter.com/seandavis12

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