Dear biojava,
 
Thank for your nice work and sharing your product.
I recently tried to run biojava product but failed with following message.
I believe I configure classpath correctly.
It seems all packages are called correctly but there is some still missing object.
I hereby pasting error messages and jar file names I downloaded.
 
/*
javac seq\TestEmbl.java
seq\TestEmbl.java:18 Class seq.EmblFormat not found.
            SequenceFormat eFormat = new EmblFormat();
 
seq\TestEmbl.java:21: Class seq.SimpleSequenceFactory not found.
            SequenceFactory sFact = new SimpleSequenceFactory();
 
seq\TestEmbl.java:25: Incompatible type for constructor. Explicit cast needed to convert org.biojava.bio.seq.SequenceFactory to org.biojava.bio.seq.io.SequenceBuilderFactory.
            new StreamReader(eReader, eFromat, rParser, sFact);
 
3 errors
*/
 
Packages I downloaded from biojava site were
bytecode-0.90.jar --> bytecode.jar (I renamed it as bytecode.jar)
xerces.jar
jakarta-regexp.jar
biojava-20010813.jar --> biojava.jar (I renamed it as biojara.jar)
 
Could kindly let me know what problem do I have and how can I solve it?
 
Thank you very much.
 
Sincerely,
TaeJin Ahn
=======================================================
Member of resarch staff
SCJP
Bioinformatics Technology Group, Biochip Project Team
Samsung Advanced Institute of Technology (SAIT), Korea
Email: [EMAIL PROTECTED]
Tel: 82-31-280-9262
=======================================================
 
 

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