Russell Smithies wrote: > > Has anyone extracted co-ordinates from protein database files and are there > suitable parsers already in BioJava ? >
Russell, There's a parser for Protein Data Bank format files that parses coordinates - have look at the PdbSAXParser in the org.biojava.bio.program.sax package... Note, it's a SAX Parser, so it doesn't populate predefined Java objects. Simon -- Simon M. Brocklehurst, Ph.D. Head of Bioinformatics & Advanced IS Cambridge Antibody Technology The Science Park, Melbourn, Cambridgeshire, UK http://www.CambridgeAntibody.com/ mailto:[EMAIL PROTECTED] _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
