If there isn't one, I have an implementation of it in Java. I wrote it directly from the algorithm as described in J. Mol Bio. Its pretty straight forward ie no modifications or optimizations...
Ryan -----Original Message----- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED]]On Behalf Of borg collective Sent: Saturday, August 17, 2002 3:28 AM To: [EMAIL PROTECTED] Subject: [Biojava-l] Java implementation of Smith-Waterman algorithm Is there a Java implementation of Smith-Waterman algorithm available on biojava? I was not able to find any reference to it in the documentation. If there isn't one, does anyone know where I can obtain the source code for one? Thanks _________________________________________________________________ Join the world�s largest e-mail service with MSN Hotmail. http://www.hotmail.com _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
