I'm working on a gene expression data visualization program --
http://genetics.stanford.edu/~ihab/caryoscope/
I have not used BioJava yet for the data model, but I would like to migrate in that direction. It seems that my data model is very similar to BioJava's, except for one thing that puzzles me: How would you folks represent multiple "tracks" of annotation values? The way I have things modeled --
http://genetics.stanford.edu/~ihab/caryoscope/doc/api/edu/stanford/genomics/domain/Dataset.html
a Dataset object maps a Feature to a data object (or null). I see you folks implement this a bit differently: a Feature implements interface Annotatable, whereby it becomes responsible for knowing about its own Annotations. Hence my question -- how would you represent a "track" of annotations as a single entity?
Thanks a lot for any help you can provide in pointing me in the right direction. Peace,
Ihab
-- Ihab A.B. Awad <[EMAIL PROTECTED]> Snr Scientific Programmer, Dept of Genetics _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
