Matthew
Schreiber, Mark wrote:
Robin -
How about overloading the constructor? That way if you provide a TreeMap the result is ordered. If not you get what you get. Many classes are dependent on SimpleAlignment so it may not pay to change it too much.
- Mark
-----Original Message----- From: Emig, Robin [mailto:[EMAIL PROTECTED] Sent: Mon 15/09/2003 3:04 p.m. To: bio java Cc: Subject: [Biojava-l] Simple alignment
Is there any objection to making SimpleAlignment take a TreeMap instead of a simple Map? The reason is that order of the sequences in the alignment is often of importance. I suppose the alternative is to create a new alignment called OrderedAlignment. -Robin _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
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