Ok; is there any best method to tell what is the seq
type is in biojava? I mean is that a dna sequence or
protein sequence etc. 

I have seen SeqAlignReadWrite.guessFileType but this
is no approriate and does work,

Thanks,
Suman K

=====
Suman K
BioInformatics Associate,
Genomics Research,
University of Missouri - Columbia.

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