If you want to see if two profiles have the same parameters you can get the
Distributions from each state and use the DistributionTools.areEmissionSpectraEqual()
method to tell you if they are the same. You should also test that the Distribution
that holds the transitions is equal.
- Mark
-----Original Message-----
From: Kirill Petrov [mailto:[EMAIL PROTECTED]
Sent: Sun 2/11/2003 8:44 a.m.
To: [EMAIL PROTECTED]
Cc:
Subject: [Biojava-l] hmm profile comparison
Hello All,
is there a way to compare 2 existing hmm profiles using biojava api?
Or probably there is another type of profiling system that allows
comparisons of the profiles rather than sequences?
Kirill
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