Hi - There have been a lot of calls for a biojava 1.3.1 maintenance release. The good news is I'm just about ready. I just need to sort out some merging of the DP code from the biojava-live version.
Before I put it out I would really like to get something resolved. Currenlty DNATools.a() == RNATools.a(). This is due to the way that the Symbols are declared in AlphabetManager.xml. I personally think this is counter intuitive and wrong. It is very easily fixable (if it needs fixing). Unless anybody disagrees I would like to make it so they are not canonical. Note that this has implications for the NUCLEOTIDE alphabet which might mean such a move is not desriable so please speak now or forever hold your peace. There have been a lot of bug fixes and minimal API breakage, there was a little bit although it is unlikely to be noticed by most people. I don't think I will be putting out a version for Java1.3 either. - Mark ======================================================================= Attention: The information contained in this message and/or attachments from AgResearch Limited is intended only for the persons or entities to which it is addressed and may contain confidential and/or privileged material. Any review, retransmission, dissemination or other use of, or taking of any action in reliance upon, this information by persons or entities other than the intended recipients is prohibited by AgResearch Limited. If you have received this message in error, please notify the sender immediately. ======================================================================= _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
