Hello. I have a FlexibleAlignment of 20 sequences, and want to get a slice of it: >Seq1 nactatcgg...atcagcgtatctgac >Seq2 nactatcgg...atcagcgtatctgac ... >Seq19 nactatcgg...atcagcgtatctgac >Seq20 nactatcgg...atcagcgtatctgac
So a slice of the Location(1,5) of this alignment should look like: >Seq1 nacta >Seq2 nacta ... >Seq19 nacta >Seq20 nacta How to do this? Alignment.subAlignment(null, Location(1,5)) returns an alignment containing all the full-length sequences (presumably because all the sequences have symbols between positions 1 and 5). Any suggestions would be greatly appreciated. Thanks, Ed -- View this message in context: http://www.nabble.com/Getting-a-Slice-of-an-Alignment-t1849222.html#a5047818 Sent from the BioJava forum at Nabble.com. _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
