There is a hint in the exception stack trace you sent: > Call getNextException to see the cause.
Posting the results from that call might help explain it a bit better. Also, you didn't include in your example code any of the calls you make to persist the sequence to BioSQL - including establishing the connection to BioSQL, etc. Judging from the stacktrace, this is a problem at the BJX/BioSQL level, so I need to see the entire example, not just the bits that are doing the filtering. cheers, Richard -- Richard Holland (BioMart Team) EMBL-EBI Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD UNITED KINGDOM Tel: +44-(0)1223-494416 _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
