Hi Does anyone has the code which takes NCBI NM RefSeq number and NCBI NC RefSeq number gets NC RefSeq from NCBI and parses it in such way so for specified NM RefSeq "gene table" object is build. "Gene table" object should have information on 3' UTR, 5' UTR, exons, introns and CD sequence. The data in "gene table" should be sufficient for example to generate sequence string with 3' UTR, 5' UTR, introns, non coding exon(s) or part(s) of exon(s) in small letters and coding exon(s) or part(s) of exon(s) in capital letters.
Thanks Dmitriy _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
