Hello, I cannot find a method in biojava to construct a profile HMM correctly from a multiple sequence alignment. So I construct a method to do it using my self made heuristic. I dont know if my heuristics is correct enough because I haven't read "Biological sequence analysis" book yet.
-- Aulia Rahma Amin Informatics Bandung Institute of Technology Indonesia > Hallo, > > Please, excuse me for possible mistakes because i'm relatively new here. > > My Question is: Is there any way in Biojava to construct a profile HMM > from a multiple sequence alignment? Are algorithms implemented like it is > described in the "Biological sequence analysis" book? > > > Thank you for possible answers. > _____________________________________________________________________ _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
