I've posted some brief HOWTOs here on how to use the new code as it progresses:
http://biojava.org/wiki/BioJava3:HowTo Hopefully the examples will make the new approach a bit clearer. The FASTA parser example does need simplifying even further, through a standard file parser utility class to go in the core module which has yet to be written. But the examples on the page are a start and show you what the convenience methods would have to implement internally (hint, hint!). cheers, Richard -- Richard Holland, BSc MBCS Finance Director, Eagle Genomics Ltd M: +44 7500 438846 | E: [EMAIL PROTECTED] http://www.eaglegenomics.com/ _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
