Hi I am new to biojava, and made few application with biojava, I trying to make a database which can update itself with NCBI and only remain behind by a day only, I am almost successfully with this task but only problem i facing is when I run my genbank loader program to upload genbank file to biosql database with a updated taxon table, biojava insert a taxon_id (ie. taxon_id != ncib_taxon_id) in taxon table, if their is any record in file which don't have it ncbi_taxon_id in taxon table (becuase that taxon is being replaced by some other in ncbi update), then biojava insert a record in taxon table such that taxon_id is some random sequence and ncbi_taxon_id is the dbxref field from file, my problem is that they are not equale, is their any way to force hibernate or richsequence to put record such that taxon_id and ncbi_taxon_id are equale in table.
thanks Deepak Sheoran North Dakota State University (Student) _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
