hi i am working on genomic variations. i am interested to initially visualize mappings from clone-ends to reference sequence. i have data in the following tab. format :
CAX100A01FOR1 1 748 scaffold_116 507411 508161CAX100A01REV1 1 702 scaffold_116 512322 511611 1st & 7th cols. represent clone-ends, the numbers are positions, 4th col. indicates the reference. How do i visualize this pair alignment in a window with biojava. thanks Natthan _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
