Hi Yiwei (and list members),
I am also a graduate student in Bioinformatics interested in the Google Summer
of Code project. The authors' current implementations of ClustalW and ClustalX
are written in C++. Binaries, code, and references are located at
http://www.clustal.org/ . Download the boldfaced references (Larkin et al 2007
and Thompson et al 1994) for the most relevant information.
Take care,
Mark
On 3/25/2010 3:14 PM, Yiwei Zhang wrote:
Hi,
I am a graduate student of computer science and my field of study is related
to Bioinformatic algorithms. I am proficient at JAVA programming. I feel
very interested in this project because currently I am working on sequence
alignment and phylogeny tree reconstruction.
My question is that, if the project requires implementing the existing
alignment algorithms of current tools, what is the
original implementation language of the tools? C++ or C or something else?
Thanks!
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