Hi, It depends what you want to do and how you intend to build up the user interface.
E.g. we are using BioJava on the server side to calculate structure alignments. For the html front end the Jmol applet is being used for visualization: http://betastaging.rcsb.org/pdb/workbench/showPrecalcAlignment.do?action=pw_ce_cp&pdb1=1VHR&chain1=A&pdb2=2IHB&chain2=A Andreas _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
