Hi Bo Li, The printing method currently does not add those characters to the display of the aligned sequences. If you need it you would have to patch the printing method...
Andreas On Tue, Feb 22, 2011 at 11:16 PM, Bo Li <[email protected]> wrote: > Hi, > > Sorry for the bothering. I tried the MSA feature by following the link: > > http://www.biojava.org/wiki/BioJava:CookBook3:MSA > > However, I can't see the symbols like ".", ":", and "*" like I can see from > the output ClustalW. > > So is there a way for users to obtain such information in the output from > MSA? > > Thanks, > Bo Li > _______________________________________________ > Biojava-l mailing list - [email protected] > http://lists.open-bio.org/mailman/listinfo/biojava-l > _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
