>>>>In my proposal can I mentioned the use of existing methods to calculate Molecular weight and Isoelectric pointin BioJava1.8?

Yes, good idea.

>>>Can I add more related methods to my proposal?
You definitely should. This is YOUR project, so you decide what to add/remove. If your ideas are sound and compelling you will have a better chance in the competition!

>>>What will be the input to these methods is it file containing protein sequences or string of the protein?

You should put in the proposal what you think would be the most appropriate method to handle the sequences. This will show how well you understand the task. Whatever you decide will have to be discussed further when it comes to implementation.

I hope that helps.

Regards,
Peter


On 28/03/2011 14:00, udana chathuranga wrote:
Hi Peter,

Thanks Peter, I have already looked in to the updated short coding exercise page http://biojava.org/wiki/Short_coding_exercise#Submission.

In my proposal can I mentioned the use of existing methods to calculate Molecular weight and Isoelectric pointin BioJava1.8? Can I add more related methods to my proposal? One more question regarding the proposal. What will be the input to these methods is it file containing protein sequences or string of the protein?.



Thanks
Regards
Udana


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