Hello Shirley,
I think you need to use AlternateTokenisation at some point; check
BJ1.8.1 Cookbook at
http://www.biojava.org/wiki/BioJava:Cookbook:Sequence
regards,
George
Quoting Shirley Hui <[email protected]>:
Hi,
I am using DNATools to generate dna Sequences.
I noticed that the static methods in DNATools a(),c(),t(),g() map to lower
case characters.
I am using using DistributionLogo class to draw sequences logos for a set of
dna Sequences.
I think DistributionLogo is calling the static methods to map the
nucleotides which is lower case.
But I want the logo output the nucleotides in uppercase. How can I do this?
Thanks for your help
shirley
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