Hi, I installed eclipse-java-kepler-R-macosx-cocoa-x86_64.tar.gz.
I'm now following this step. But I don't set 'm2e - Maven Integration for Eclipse'. Is the tutorial for previous versions of eclipse but not the current version? http://biojava.org/wiki/BioJava3_eclipse#Plugin_Installation On Tue, Jul 23, 2013 at 8:16 AM, Andreas Prlic <[email protected]> wrote: > you might want to learn how to use an IDE, such as eclipse. > > http://biojava.org/wiki/BioJava3_eclipse > > Andreas > > > On Mon, Jul 22, 2013 at 9:25 PM, Peng Yu <[email protected]> wrote: >> >> Hi, >> >> I see some demos in biojava3 source repository. >> >> ~/dvcs_src/biojava/biojava3-alignment/src/main/java/demo$ dir >> CookbookMSA.java DemoAlignProteins.java DemoLoadSubstMax.java >> TestDNANeedlemanWunsch.java >> >> I just learned how to use mvn to start a new project and added biojava >> info to pom.xml as in the following. But I'm not sure how to compile >> the demo and run it. Could anybody show the detailed procedure on how >> to use them? Thanks. >> >> ~/linux/test/java/maven/bin/mvn/my-app$ cat pom.xml >> <project xmlns="http://maven.apache.org/POM/4.0.0"; >> xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"; >> xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 >> http://maven.apache.org/maven-v4_0_0.xsd";> >> <modelVersion>4.0.0</modelVersion> >> <groupId>com.mycompany.app</groupId> >> <artifactId>my-app</artifactId> >> <packaging>jar</packaging> >> <version>1.0-SNAPSHOT</version> >> <name>my-app</name> >> <url>http://maven.apache.org</url> >> <dependencies> >> <dependency> >> <groupId>junit</groupId> >> <artifactId>junit</artifactId> >> <version>3.8.1</version> >> <scope>test</scope> >> </dependency> >> <dependency> >> <groupId>org.biojava</groupId> >> <artifactId>biojava3-core</artifactId> >> <version>3.0.6</version> >> </dependency> >> </dependencies> >> <repositories> >> <repository> >> <id>biojava-maven-repo</id> >> <name>BioJava repository</name> >> <url>http://www.biojava.org/download/maven/</url> >> </repository> >> </repositories> >> </project> >> >> -- >> Regards, >> Peng >> _______________________________________________ >> Biojava-l mailing list - [email protected] >> http://lists.open-bio.org/mailman/listinfo/biojava-l > > > > > - -- Regards, Peng _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
